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An automated Calculation Pipeline for Differential Pair Interaction Energies with Molecular Force Fields using the Tinker Molecular Modeling Package

  • An automated pipeline for comprehensive calculation of intermolecular interaction energies based on molecular force-fields using the Tinker molecular modelling package is presented. Starting with non-optimized chemically intuitive monomer structures, the pipeline allows the approximation of global minimum energy monomers and dimers, configuration sampling for various monomer-monomer distances, estimation of coordination numbers by molecular dynamics simulations, and the evaluation of differential pair interaction energies. The latter are used to derive Flory-Huggins parameters and isotropic particle-particle repulsions for Dissipative Particle Dynamics (DPD). The computational results for force fields MM3, MMFF94, OPLS-AA and AMOEBA09 are analyzed with Density Functional Theory (DFT) calculations and DPD simulations for a mixture of the non-ionic polyoxyethylene alkyl ether surfactant C10E4 with water to demonstrate the usefulness of the approach.

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Verfasserangaben:Felix Bänsch, Mirco Daniel, Harald Lanig, Christoph Steinbeck, Achim Zielesny
DOI:https://doi.org/10.26434/chemrxiv-2024-pkmxm
Dokumentart:Preprint
Sprache:Englisch
Datum der Veröffentlichung (online):15.07.2024
Jahr der Erstveröffentlichung:2024
Veröffentlichende Institution:Westfälische Hochschule Gelsenkirchen Bocholt Recklinghausen
Datum der Freischaltung:23.07.2024
Freies Schlagwort / Tag:DPD, Dissipative Particle Dynamics; Flory-Huggins parameter; intermolecular interaction; molecular force field
Fachbereiche / Institute:Institute / Institut für biologische und chemische Informatik
Lizenz (Deutsch):License LogoEs gilt das Urheberrechtsgesetz

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