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Mesoscopic Simulation of Phospholipid Membranes, Peptides, and Proteins with Molecular Fragment Dynamics (2015)

Truszkowski, Andreas ; van den Broek, Karina ; Kuhn, Hubert ; Zielesny, Achim ; Epple, Matthias

A molecular fragment cheminformatics roadmap for mesoscopic simulation (2014)

Truszkowski, Andreas ; Daniel, Mirco ; Kuhn, Hubert ; Neumann, Stefan ; Steinbeck, Christoph ; Zielesny, Achim ; Epple, Matthias

SPICES: a particle-based molecular structure line notation and support library for mesoscopic simulation (2018)

van den Broek, Karina ; Daniel, Mirco ; Epple, Matthias ; Kuhn, Hubert ; Schaub, Jonas ; Zielesny, Achim

Jdpd: an open java simulation kernel for molecular fragment dissipative particle dynamics (2018)

van den Broek, Karina ; Kuhn, Hubert ; Zielesny, Achim

Steps Towards an Open All-in-one Rich-Client Environment for Particle-Based Mesoscopic Simulation (2018)

van den Broek, Karina ; Epple, Matthias ; Kuhn, Hubert ; Zielesny, Achim

PSMILES – A particle-based Molecular Structure Representation for Mesoscopic Simulation (2018)

van den Broek, Karina ; Daniel, Mirco ; Epple, Matthias ; Schaub, Jonas ; Kuhn, Hubert ; Zielesny, Achim

Mesoscopic Simulations: New Membrane Models & Studying the Mechanism of the Cyclotide Kalata B1 and it’s Mutants (2017)

van den Broek, Karina ; Kuhn, Hubert ; Zielesny, Achim ; Epple, Matthias

Mesoscopic simulation of the membrane disrupting activity of the cyclotide Kalata B1 (2016)

van den Broek, Karina ; Kuhn, Hubert ; Zielesny, Achim ; Epple, Matthias

MFsim — an open Java all-in-one rich-client simulation environment for mesoscopic simulation (2020)

van den Broek, Karina ; Daniel, Mirco ; Epple, Matthias ; Hein, Jan-Mathis ; Kuhn, Hubert ; Neumann, Stefan ; Truszkowski, Andreas ; Zielesny, Achim

Quantitative Estimation of Cyclotide-Induced Bilayer Membrane Disruption by Lipid Extraction with Mesoscopic Simulation (2021)

van den Broek, Karina ; Epple, Matthias ; Kersten, Lisa Sophie ; Kuhn, Hubert ; Zielesny, Achim